Hi Brandon,
When running scripts from scheduled tasks/cron, you need to make sure the (cloverleaf) profile settings are correct.
We are running on RHEL and when running scripts from cron, we first need to set the profile with these commands:
. /etc/profile
. /home/hci/.profile
After that, I see we do this as well:
# load function for execution in cron
FPATH=${CL_INSTALL_DIR}/integrator/kshlib; export FPATH
. $FPATH/setroot
. $FPATH/setsite
Zuyderland Medisch Centrum; Heerlen/Sittard; The Netherlands